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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908230.1_cds_XP_016458349.1_51987
CDS Infomation

[gene=LOC107782028] [db_xref=GeneID:107782028] [protein=acetolactate synthase small subunit 1, chloroplastic-like] [protein_id=XP_016458349.1] [location=join(158609..158838,159255..159468,160226..160309,160398..160466,162236..162319,162401..162553,163368..163454,164272..164376,164490..164612,166190..166342,166891..166956,167735..167818)] [gbkey=CDS]
Sequence

ATGGCGGCTGTTTCAACTCACTTCAACAGCTCTCTAAATAAACCCTTCCTTTCTCTCTAT
TTCTCTATTCCCCATTTGGGTTTCTCCCAAGTTGTTCAATTTCCAACTTTGAAACCAAAA
TTTCCCCTTTCAAAGCCCAAAACAGTTGTAATTTCTGCCACCAAAGCTGATGGAACATAT
GCAAATGAAGACGACTCTCTCACAACTTTCGACTCTTCCATCAGACAAAAGACTAGGCGC
CATACGATTCAAGTGTTTGTTGGGGATGAAAGTGGAATGATCAATCGTATTGCGGGAGTC
TTTGCTCGAAGAGGGTACAACATTGAGTCTCTTGCTGTTGGTCTAAACAAGGACAAGGCT
CTTTTTACTATAGTTGTTTCTGGAACTGAAAGGGTGTTGCAGCAAGTTATGGAACAGTTA
CAAAAGCTTGTAAATGTGATCAAGGTTGAAGATCTATCCAAGGAGCCACAAGTTGAACGT
GAATTAATGCTTATTAAAATCAGCGCCGATCCAAAATACCGCGCAGAGGTTATGTGGTTG
GTGGACGTTTTCAGGGCAAAAATTGTGGATATATCTGATCATTCTCTGACTATTGAGGTA
ACTGGAGATCCAGGGAAGATGGTGGCTGTTCAGAGGAACTTAAGTAAATTTGGAATTAGA
GAAATTGCTCGTACTGGGAAGATTGCCTTGAGAAGGGAAAAAATGGGGGAATCTGCTCCT
TTTTGGCGGTTTTCAGCAGCATCATACCCAGATCTTGAAGGTGCAATGTCTGCTGGTACT
ATTTCGAGGACAACCAAGAGGACTCCTAATGGAGAATCTATGTCTATGGCTGAGGGAGAT
GTCTATCCTGTTGAGACAGATGACAACTCTGGAGTCAGTCAAGTTCTTGATGCTCACTGG
GGTGTTCTCAATGATGAAGATACAAGTGGGCTTCGCTCACATACTTTGTCAATGCTTGTG
AATGACACTCCTGGAGTTCTCAACATAGTCACCGGAGTTTTTGCTCGACGAGGGTATAAC
ATCCAAAGTTTAGCTGTTGGACATGCTGAAGTTGAGGGGCTTTCTCGTATTACAACGGTT
GTTCCTGGCACAGATGAGTCAGTTAGCAAGTTGGTGCAGCAACTGTATAAGTTGGTTGAT
ATTCATGAGGTTCGGGATATTACTCACCACCCATTTGCGGAAAGAGAACTAATGTTGATA
AAGATTGCTGCGAATGCTGCAGCACGCCGCAATGTTCTTGACATTGCCAGCATTTTCAGA
GCAAAAGCTGTTGATGTGTCTGACCACACTATAACTCTTGAGCTTACAGGAGATTTGCAT
AAGATGGTTGCTTTGCAGCGGCTACTAGAGCCTTGTGGTATTTGTGAGGTAGCGCGAACA
GGACGTCTGGCGCTGGTACGTGAATCAGGTGTGGATTCGAAGTACTTGCGAGGATATTCA
TACCCTTTGTAG

Peptide Sequence

PEP ID

XP_016458349.1
PEP Infomation

PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAAVSTHFNSSLNKPFLSLYFSIPHLGFSQVVQFPTLKPKFPLSKPKTVVISATKADGTY
ANEDDSLTTFDSSIRQKTRRHTIQVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKA
LFTIVVSGTERVLQQVMEQLQKLVNVIKVEDLSKEPQVERELMLIKISADPKYRAEVMWL
VDVFRAKIVDISDHSLTIEVTGDPGKMVAVQRNLSKFGIREIARTGKIALRREKMGESAP
FWRFSAASYPDLEGAMSAGTISRTTKRTPNGESMSMAEGDVYPVETDDNSGVSQVLDAHW
GVLNDEDTSGLRSHTLSMLVNDTPGVLNIVTGVFARRGYNIQSLAVGHAEVEGLSRITTV
VPGTDESVSKLVQQLYKLVDIHEVRDITHHPFAERELMLIKIAANAAARRNVLDIASIFR
AKAVDVSDHTITLELTGDLHKMVALQRLLEPCGICEVARTGRLALVRESGVDSKYLRGYS
YPL

Transcript Sequence

Gene sequence data has not been registered.